DR MARTIN CHAPMANCurriculum Vitae

Experience

Now
Guy's and St Thomas' NHS Foundation Trust
Leading on and delivering the AI, software engineering and Dev/MLOps components of projects within the trust and across the NHS. Based in the AI Centre for Value-Based Healthcare.
2025
King's College London
2022
King's College London
Led funded research projects, developed software, conducted research, and taught as part of a tenured academic position focusing on the use of technology to support medical decision making.
2014
King's College London
Developed software and conducted research for projects focusing on the use of technology to support decision making.
2011
King's College London
Taught computer science topics alongside my doctoral studies and research. Regularly presented to classes of 350+ students, and received teaching awards for student engagement and support.

Education

2016
Doctor of Philosophy (Ph.D.) in Computer Science
King's College London
Thesis: 'Cyber Hide-and-Seek'. Explored strategies for network attackers and defenders by simulating their behaviour within a multi-agent (artificial intelligence), distributed research platform. Supervised by Professor Peter McBurney and Professor Michael Luck.
2011
Bachelor of Science (BSc) in Computing
University of Liverpool
Honours project: 'Social networking and information diffusion in automated markets'. Explored the impact of social interactions on the performance of market traders by simulating their behaviour within a multi-agent, distributed research platform. Supervised by Professor Peter McBurney and Professor Katie Atkinson.

Grants

3
2023
HDR UK and the NIHR · £54070.69
2022–2026
National Institute for Health and Care Research · £2195908.0
2021–2022
EPSRC (Impact Acceleration Award) · £55564.64

Publications

16
Generating Computable Phenotype Intersection Metadata Using The Phenoflow Library2025 · AMIA Joint Summits on Translational Science
M Chapman, L Rasmussen, J Pacheco, L Wiley and V Curcin
Long Covid Demographic And Secondary Care Referral Characteristics In Primary Care: Analysis Of Anonymised Primary Care Data From A Multiethnic, Deprived Urban Area In The Uk2024 · npj Primary Care Respiratory Medicine
M Chapman, S Durbaba, F Tydeman, M Friend, L Duly, J Moore, V Curcin, Y Wang, G Kaltsakas, T Chalder, N Hart and M Ashworth
Mechanisms For Integrating Real Data Into Search Game Simulations: An Application To Winter Health Service Pressures And Preventative Policies2024 · AMIA Joint Summits on Translational Science
M Chapman, A G-Medhin, K Daneshi, T Bramwell, S Durbaba, V Curcin, D Parmar, H Boulding, L Becares, C Morgan, M Molokhia, P McBurney, S Harding, I Wolfe, M Ashworth and L Poston
Ink: Non-Repudiation For Large Language Models (LLMs) In Healthcare2024 · AMIA Joint Summits on Translational Science
M Chapman, E Fairweather and C Hampson
Using Version Control Systems To Support High-Quality Phenotype Definitions2023 · AMIA Joint Summits on Translational Science
M Chapman, L V Rasmussen, J A Pacheco and V Curcin
Connecting Computable Phenotypes With Multiple Health It Standards Using The Phenoflow Library2022 · AMIA Clinical Informatics Conference
M Chapman, L V Rasmussen, J A Pacheco and V Curcin
Using Microservices To Design Patient-Facing Research Software2022 · Proceedings of the IEEE 18th International Conference on e-Science
M Chapman, A G-Medhin, I Sassoon, N Kökciyan, E I Sklar and V Curcin
Desiderata For The Development Of Next-Generation Phenotype Libraries2021 · GigaScience
M Chapman, S Mumtaz, L Rasmussen, A Karwath, G V Gkoutos, D Thayer, J Pacheco, R Richesson, E Jefferson, S Denaxas and V Curcin
Using Computable Phenotypes In Point-Of-Care Clinical Trial Recruitment2021 · Digital Personalized Health and Medicine
M Chapman, J Domínguez, E Fairweather, B C Delaney and V Curcin
Phenoflow: A Microservice Architecture For Portable Workflow-Based Phenotype Definitions2021 · AMIA Joint Summits on Translational Science
M Chapman, L Rasmussen, J Pacheco and V Curcin
Covid-19 Analytics In Jupyter: Intuitive Provenance Integration Using Provit2021 · 9th International Provenance and Annotation Workshop
M Chapman, E Fairweather and V Curcin
Computational Argumentation-Based Clinical Decision Support2019 · 18th International Conference on Autonomous Agents and MultiAgent Systems
M Chapman, P Balatsoukas, M Ashworth, V Curcin, N Kökciyan, K Essers, I Sassoon, S Modgil, S Parsons and E I Sklar
A Microservice Architecture For The Design Of Computer-Interpretable Guideline Processing Tools2019 · 18th International Conference on Smart Technologies
M Chapman and V Curcin
Learning The Language Of Error2015 · 13th International Conference on Automated Technology for Verification and Analysis
M Chapman, H Chockler, P Kesseli, D Kroening, O Strichman and M Tautschnig
Playing Hide-And-Seek: An Abstract Game For Cyber Security2014 · 1st International Workshop on Agents and CyberSecurity
M Chapman, G Tyson, P McBurney, M Luck and S Parsons
Social Networking And Information Diffusion In Automated Markets2012 · Joint International Workshop on Trading Agent Design and Analysis
M Chapman, G Tyson, K Atkinson, M Luck and P McBurney

Software

16 repos
handsRun AI Search Game Hide-and-Seek simulations as a decision-support tool
consultModular decision-support system for chronic condition self-management
phenoflowStandardise and share computable disease definitions
bertBERT fine-tuning pipeline
reflectMiddleware for interacting with wearable devices
learning-errorsAbstractly represent software error traces as finite automata.
nrStore data using different non-repudiation mechanisms, including a distributed ledger blockchain.
ohdsi🐋 OHDSI stack Docker configuration
jupyter🐋 JupyterHub Docker configuration
UIUser interface backend. Part of user-web-facing.
withingsMiddleware for interacting with Withings Nokia Health devices.
ehr-fhir-converterConvert arbitrary EHR extracts to FHIR.
tmrwebStore clinical guidelines and determine their interactions.
social-tradersA plugin for the multi-market simulator JCAT, enabling social interaction between autonomous traders.
drgInfrastructure for running a distributed HANDS research game.
l-starA high-level Java-based implementation of the L learning algorithm.

Talks

27
GeNotes: Improving the accessibility and usability of genomic clinical guidelines for cliniciansGuy's and St Thomas' NHS Foundation Trust, London, 2026Extracting Structured Data From Unstructured Clinical Documentation with LLM-based Tools: Genomic Biomarkers and Cancer HistoryImplementing AI in Genomics Masterclass, London, 2025Phenoflow: An Architecture for FAIRer PhenotypesThe Northwestern University Clinical and Translational Sciences (NUCATS) Institute/Institute for Augmented Intelligence in Medicine (I.AIM)/Center for Health Information Partnerships (CHIP), Northwestern University, Chicago, 2025 Generating Computable Phenotype Intersection Metadata Using the Phenoflow LibraryAMIA Informatics Summit, Pittsburgh, 2025 (presented by Professor Vasa Curcin)Mechanisms for Integrating Real Data into Search Game Simulations: An Application to Winter Health Service Pressures and Preventative PoliciesAMIA Informatics Summit, Boston, 2024Technical Validation through Automated TestingComputational Phenotyping and Software Engineering, AMIA Informatics Summit, Boston, 2024Scalable architectures for phenotype librariesBuilding (inter)national phenotype libraries, AMIA Annual Symposium, New Orleans, 2023Using AI to understand how preventative interventions can improve the health of children in the UK and reduce winter pressures on the NHS.Rethinking Poverty, Insecurity and the Cost of Living Crisis in the North West and Beyond, Liverpool, 2023Using AI to understand how preventative interventions can improve the health of children in the UK and reduce winter pressures on the NHSHealth Foundation (All Analysts Series - Housing Conditions and Young People’s Health), London, 2023Using AI to understand how preventative interventions can improve the health of children in the UK and reduce winter pressures on the NHSHDR UK, London, 2023Using Microservices to Design Patient-facing Research SoftwareIEEE 18th International Conference on e-Science, Salt Lake City, USA, 2022Phenoflow: An Architecture for Computable PhenotypesApplying FAIR principles to computable phenotype libraries, ELIXIR All Hands, Amsterdam, 2022Phenoflow 2021Clinical Natural Language Processing Group, University of Edinburgh, 2021COVID-19 Analytics in Jupyter: Intuitive Provenance Integration using ProvItProvenance Week, 2021Using computable phenotypes in point of care clinical trial recruitmentMedical Informatics Europe (MIE), 2021Phenoflow: A Microservice Architecture for Portable Workflow-based Phenotype DefinitionsAMIA Informatics Summit, 2021MICRE: Microservices In MediCal Research EnvironmentsKing's Digital Lab, 2020A Microservice Architecture for the Design of Computer-Interpretable Guideline Processing ToolsEUROCON, COHEAT, Novi Sad, Serbia, 2019Martin Chapman: Research Overview, 2019King's College London, 2019Building a Blockchain POC for a major financial institution: the capabilities and limitations of existing technologiesBitcoin and Blockchain Technologies Workshop, The University of Stirling, 2016Martin Chapman: Research Overview, 2017King's College London, 2017Cyber Hide-And-Seek: Ph.D. Viva PresentationKing's College London, 2015SocialTraders: A practical examples of agents.Internal Research Seminar, King's College London, 2011.Computational Search GamesCentre for Computational Finance and Economic Agents, The University of Essex, 2014.Social Networking and Diffusion in Markets as demonstrated by the CAT platformAAMAS, AMEC-TADA, Valencia, Spain, 2012Abstractions for Network SecurityInternal Research Seminar, King's College London, 2012. Playing Hide-and-Seek: An Abstract Game for Cyber SecurityAAMAS, ACYSE, Paris, France, 2014

Academic Service

18 roles
2012
European Conference on Multi-Agent Systems (EUMAS)
2012–2018
The Knowledge Engineering Review (KER)
2015
Computer-Aided Verification (CAV)
2016–2018
Autonomous Agents and Multi-Agent Systems (AAMAS)
2017–2025
Workshop on Trusted Smart Contracts (WTSC)
2017–2021
Learning Health Systems
2017
Digital Health
2020–2024
AMIA Annual Symposium
2020
AMIA Informatics Summit
2022
Drug Safety
2023–2024
Software and Systems Modelling
2023
International Journal of Medical Informatics
2023
Research Involvement and Engagement
2024–2025
Artificial Intelligence in Medicine (AIME)
2024
JAMIA Open
2024
Global and Public Health
2024
Journal of Healthcare Informatics Research
2025
Discover Applied Sciences

Languages

Procrastinations

not-so-naivecoinAdding Bitcoin-like features to Naivecoin.
google-scholar-extendednodejs module for listing profile information
coincoinIllustrative cryptocurrency client and middleware.
world-cup-sweepOffice world cup sweep stake calculator.

Hobbies